Bally Midway games that ran on the MCR boardset (Tapper, Tron, Kick/Kickman, Satan's Hollow, Spy Hunter, etc...) all output video at a vastly different rate than most all other games.
(Assuming vertical orientation) they run at 480x512 at 30 Hz, Interlace mode. Where most other Bally/Midway and most others run at 224x256 at 60.60 Hz, non-interlace.
Even if you can get them to work on the arcade monitor without them rolling or tearing, they will "jump" and be hard on your eyes due to the interlacing.
Most newer monitors and the replacement chassis don't support refreshes below 48 (48-65 usually) so they won't be able to draw the interlace modes.
About the only thing you can do is use Advance Mame and tell it to chop the resolution down and use a non-interlace mode. But since you're using AVGA and Mamem32, you may not be able to select a more compatible mode.