Did some initial testing. First off, here is what the game does when powered on: all of the playfield and backglass lights are on, and the gameover light is flashing. The displays do not show any signs of life. Other than that, nothing.
All the power block fuses are good. I started the initial testing and apparently my power supply is bad, or at least needs some work. The input voltages are present and listed below:
pin1 11.5VAC needed, ~12.6 present
pin2 11.5VAC needed, ~12.6 present
pin3 14VAC needed, ~15 present
pin5 14VAC needed, ~15 present
That is where things start to suck. There are no 5VDC, or -12VDC present at the top connector that supplies the MPU. The -12 pin goes straight to solid 0 on the DMM. The 5 volt pins flutter around .3 volts. I notice that the connector up there was kind of wobbly, so I at least need to take out the power supply and reflow some solder joints. The right side connector that supplies the displays has a 60VDC pin, a 42VDC pin, a 4VDC pin, and an 8VDC pin. All pins show nothing except the 8VDC pin - it shows 16VDC??
In the marvin3m manual, it says that if a -12VDC supply is missing, your MPU is ---fouled up beyond all recognition---. However, since nothing is getting thru I think I am safe there at least.
Oh, and it appears that the trouble large caps on the power supply have been changed at some point. Last thing, yes, the J1 PS connector is installed the right way.

So, is the peanut gallery in aggreement that I have a bad power supply?
Addition: I went ahead and took out the power supply before I even finished this post.

Anyways, the problems are QUITE evident after getting to the back of the power supply. Fist off, I didn't have to desolder the Q1 transistor because the bad solder joints kind of just fell off.

I noticed some masking tape here and there adn found out it was a brilliant way of isolating a repaired lifted trace repair.

The repaired trace was on one of the 14VAC input lines, so I'm a little worried about MPU damage. Oh and the J1 connector pin header - I think my 6 month old girl could have soldered that better.

Cold solder and broken joints galore.
Needless to say, I don't think this power supply is going back in the machine. I'm liking this pin hobby already! There is so much more crap to mess with.

I feel like I have already expanded my electrical knowledge by about 10 times.