You need a text editor that can record and run simple macros.
I use Crimson Editor for stuff like this. First load your gamelist and record a macro that adds COPY to the start of one line, then moves to the next line. Run the macro and every line will be changed to:
COPY chomper.zip
COPY mschomper.zip
COPY bigmonkey.zip etc.
Then do a Find & Replace, replacing .zip with .zip c:\myfolder\ so you end up with a file like this:
COPY chomper.zip c:\myfolder\
COPY mschomper.zip c:\myfolder\
COPY bigmonkey.zip c:\myfolder\ etc.
Save this text file in your games folder as ROMSORTER.BAT and run it. It should copy all the roms that were in your gamelist to C:\myfolder