I've got one with two boards installed in my MJ that use non-standard JAMMA controls -- one with an analog stick and one with a trackball. Having said that, I've never had to
share controls beyond the standard JAMMA between boards -- you might need some diodes if you ran kick harnesses to multiple boards in such a set up (or not, since they are all powered and use a common ground ... I need to think about that ... or ask somebody smarter than I am).
Clay's MultiJAMMA can be hard to find, although they do come up for sale every now and again. Also, the games are all powered up at all times, which can be disconcerting if, say, P2B3 was used to increase volume on one of the games -- you play one game, then switch to another with booming volume levels (GT2K comes to mind).
You might consider the 2-way switch from
Mike's Arcade or the 6-in-1 that
JammaBoards and
Y-Plus (aka Yaton) sell.
IMPORTANT NOTE: The 6-in-1 does not share the -5V line, so you will need to make
modifications if you need the -5V. Similarly, if you use PC power supplies in Clay's kit, you will need to run -5V to a separate connector on the switch boards.
EDIT: Fixed bad link-fu
EDIT2: FWIW, I resolved my issue with the volume on GT2K by desoldering and lifting the contact for P2B3 on the switch board. Works like a charm and all I have to do to is solder the connector back if I want to swap GT2K for another game.