Honest opinon? Get an ati card with hardware rotation support... every card nvidia has ever made in the history of the company as been crap when you look at visual quality/settings alone.
I don't want to start a flame war, but I have the same feelings when it comes to ATI and linux support. Now, if your setup is doing exactly what I want mine to do, I may give it a second thought...
Nvidia does have built in HW support for rotation, it's just a matter of getting to it.
I am heading down the right path though. I have downloaded a program called iRotate at
http://www.entechtaiwan.net/util/irotate.shtm which calls my video cards HW rotate function, and can do it via command line... so under MALA's "Other Emu Config" -> "Execution" tab's pre execution command line I have added the following:
C:\Program Files\iRotate\iRotate.exe /rotate=90
and post execution:
C:\Program Files\iRotate\iRotate.exe /rotate=0
Now I just need to make sure the focus is correct on everything and adjust the emulators screen size to my liking...
Definitely making progress...