I've got a Dynamo cab and I went the J-Pac route. Essentially all I needed to get it working was to setup the PC, install the ArcadeVGA card, connect it to the J-pac, and turn on the cabinet. Hack a set of amplified speakers and you should be all set, provided your controls are wired to your JAMMA harness correctly.
Everything, including your coin door, should work.
And like CheffoJeffo said, then all you need to do is wire up any ADDITIONAL buttons to the J-Pac in exactly the same manner as you'd wire an I-Pac.
I'd strongly suggest the J-Pac route just so you don't have to alter the existing harness. At any point, you could swap out the J-Pac for a JAMMA board.