Rick,
Original Ms. Pacman boards used AC voltage inputs. They rectified them to DC on the Pacman pcb. Unless you put a switching power supply in the cabinet and modify the wiring so your board can take DC voltages (see Bob Roberts site), you can't do Jamma.
Also, Ms. Pacman has a 4-way joystick with zero buttons. Unless you hack one of the player start buttons to fire, you can't play Galaga.
Also, Nintendo games (e.g. Donkey Kong) use inverted video, so you'll need extra circuitry to make the shift -- not really worth the trouble.
Original Pacman / Ms. Pacman wiring isn't suited for Jamma.
Sorry,
Rocky