OK, I am (--this--) close to being done with my cabinet, 4 months in the making on and off

I am at a little problem though. I am not a handy person, so I can't just "eye" something and get it right the first time, so I figured I would ask for help.
Anyways, I purchased two Happ Competition Joysticks, but the instructions do not say what screws to use for mounting... nor does the website. It looks like the holes are 6mm in width, and with my 3/4 MDF I would want maybe 1 1/4" length screws to bolt them down. Any suggestions on that?
Also, I plan on mounting my IPAC with a piece of bubblewrap seperating it from the wood. What size screws do you guys suggest for mounting the IPAC?