Are they jumper connectors?
To answer your question about where to get the pins,
I sourced those pins (and connectors) for the UHID and U360 0.1" headers from Action-Electronics.com in California.
Search for "Molex KK pins".
They are $2.50 per 100 for the pins. (Shipping may be a deal breaker unless you're order more stuff. otherwise, just order a few pins from ebay, or digikey).
However, I personally dislike those connectors.
I would recommend replacing all that with 0.062" or 0.093" molex connectors.
(also available from Action-Electronics.com and DigiKey)