Any ideas what could be causing the weird "window" problem? I don't see anything in that ini file editing that would affect that, I must have ticked something in the mala options without thinking that is doing it, but I'm not sure what.
Have you rotated your windows desktop to be vertically oriented before launching MALA? I get a similar looking thing if I have my windows desktop set to be vertically based instead of the default, horizontal windows desktop before launching the program.
To remedy this, there's a program out there called iRotate (google it, it's free). This program sits in your system tray, and allows you to quickly toggle all 4 windows screen orienations from a single click, or by a hotkey combination which your setup is likely unable to reproduce, even after messing around with iRotates .ini configuration. The good news is that iRotate has a command line option which I found through their forums, which allows you to launch the program, rotate the windows screen to horizontal, then close itself, all through one DOS command. If I remember correctly, I believe I have the frontend loading from a batch file, in which windows is forced into horizontal mode before calling MALA.
My current boot setup is kinda queer, largely due to the "unique" loading behavior of the GGG Key Wiz.
1. KeyWiz uploader loads custom key set "A"
2. KeyWiz uploader set to launch my batch file when it finally decides it's OK to upload set A (pssstt... buy an ipac next time

3. Batch file
a. run iRotate to force horizontal orientation (my setup rotates, and depending how the last game was oriented, I tyically have the desktop set to match due to internet browsing or something) then close it out, so this resource isn't being kept around in memory.
b. run MALA with the /wait flag set, which means when I close MALA then continue with the batch file commands
c. Run iRotate again permanently so it shows up in the system tray always for quick screen rotation to play in windows
d. Launch a keyboard program which I got from google, which is better then the one that comes with windows, so I can use my trackball and buttons to navigate windows w/o a wireless keyboard pulled out.
Hope that helps. Getting close for sure!