I swapped the yoke out and used the purity rings from the new tube. The picture was upside down and inverted. I swapped both the vertical and horizontal yoke wires and then it was right side up but backwards. I finally found the right combination of swapping the horizontal wires only fixed both problems. (I don't claim to understand why)
I was still having problems with heavy static and dark picture intermittently. I found that the video connector coming from the Jamma harness had bad contact on the punch-down wires. This may have been my original probem (I.E. missing green). Every time I would try to fix/fiddle with it, it would do something different.
Anyway, the burn-in is gone and I learned something....
Thanks, everyone.