If you have lots of free time on your hands, you can create custom .cfg files for every game. I found all my neo-geo games which I made config files by hand before ever playing them would not show the ok screen.
If you don't know where that is, open a game, hit tab, map specific controls to that particular game, you don't really have to map anything just have a config file for specific games, and save. Now check in your mame/cfg folder to see the one for the game you just played. It will look something like this:
<?xml version="1.0"?>
<!-- This file is autogenerated; comments and unknown tags will be stripped -->
<mameconfig version="10">
<system name="gtg2t">
<input>
</input>
</system>
</mameconfig>
If you are patient, you can do this for every game you want to play.

I wouldn't recommend this though since wiggling the joystick is easy. I had to make them anyways to setup trackball games and neogeo games.