Well, I found a Joust schematic online. There's three inputs for coins, left center and right. I'd link it, but don't want to kill their bandwidth. Easy enough to find in a search, though.
I'm sure other games are similar.
I tried hacking in the support myself, and successfully got Joust with three coin inputs. Unfortunately the third slot inputted FIVE credits. Yah, I'm no emulation programmer!

Edit: I got it, and it was easier than I thought.
Edit2: I *didn't* get it. It was registering the left coin input twice.