Yeah thanks again for the reply.  What I will do is disable the downloading in the prefrences, and then try to get a game to run setting is up manually.  I am going to set it up on the desktop and use Daphne 99.7 on my arcade to be kind of my example.  I know where the roms go! LOL! Then I will tell it where my framefiles are and edit the frame file to show where the vldp folder is with the video stuff in that.  
Now in Hyperspin I will need to edit the xml because it only shows lair.zip rom and I want to play the dl21 aka the Dragon's Lair 2.1 revision.  I like that one better.  Although the original one was just random action scenes.
Yeah I own the dvd player games aka the ones you can play in a normal home dvd player.  I don't "own" Thayer's Quest but I have it in version 99.7...No big deal though...I mean I should be able to get it to work, but if not I will buy a copy of it if I can find it.  If I can't find Space Ace I may just buy another copy of that.  If I have to redownload all this stuff how long do you think it will take, and also does it download the roms as well?