I've also been working on getting the Dreamcast hooked up to my arcade monitor using a VGA box and Andy's video amplifier (same as the JPAC).
Thanks to help from both Andy and Pookycade, I have it working now.
My VGA box also required the RGB outputs to be pulled to ground through resistors (I used 47k Ohms, works great!). Otherwise the picture was completely white.
Anyway, here are a few pictures of the modifications necessary to connect my DC VGA box (manufactured by Madness Gameware) to a JPAC or Ultimarc Video Amp:
(http://www.pyronious.com/images/emulation/select_wire.jpg)
This image shows how the 15/31kHz select wire has been cut.
(http://www.pyronious.com/images/emulation/termination.jpg)
This image shows the resistors pulling the RGB outputs to ground (termination).
As you can see in the 2nd image it was much easier to solder the resistors where the traces to the VGA connector begin rather than end.
Hope this helps someone.